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CETSA and thermal proteome profiling strategies for target identification and drug discovery of natural products Journal article
Tu,Yanbei, Tan,Lihua, Tao,Hongxun, Li,Yanfang, Liu,Hanqing. CETSA and thermal proteome profiling strategies for target identification and drug discovery of natural products[J]. Phytomedicine, 2023, 116, 154862.
Authors:  Tu,Yanbei;  Tan,Lihua;  Tao,Hongxun;  Li,Yanfang;  Liu,Hanqing
Favorite | TC[WOS]:30 TC[Scopus]:31  IF:6.7/6.2 | Submit date：2023/08/03
Cellular Thermal Shift Assay  Natural Products  Target Discovery  Target Validation  Thermal Proteome Profiling  
The Second Asia-Oceania Human Proteome Organization (AOHUPO) Online Education Series on the Renaissance of Clinical Proteomics: Biomarkers, Imaging and Therapeutics Journal article
Low, Teck Yew, Chen, Yu-Ju, Ishihama, Yasushi, Chung, Max Ching Ming, Cordwell, Stuart, Poon, Terence Chuen Wai, Kwon, Ho Jeong. The Second Asia-Oceania Human Proteome Organization (AOHUPO) Online Education Series on the Renaissance of Clinical Proteomics: Biomarkers, Imaging and Therapeutics[J]. MOLECULAR & CELLULAR PROTEOMICS, 2022, 21(12), 100436.
Authors:  Low, Teck Yew;  Chen, Yu-Ju;  Ishihama, Yasushi;  Chung, Max Ching Ming;  Cordwell, Stuart; et al.
Adobe PDF | Favorite | TC[WOS]:1 TC[Scopus]:1  IF:6.1/6.0 | Submit date：2023/08/31
Proteomics  Education  Asia Oceania Human Proteome Organization  Clinical Proteomics  Biomarkers  Imaging  Therapeutics  
Asia-Oceania HUPO: Past, Present, and Future Journal article
Ishihama, Y., Chen, Y. J., Cho, J. Y., Chung, M. C. M., Cordwell, S. J., Low, T. Y., Poon, C. W., Kwon, H. J.. Asia-Oceania HUPO: Past, Present, and Future[J]. MOLECULAR & CELLULAR PROTEOMICS, 2021, 100048-100048.
Authors:  Ishihama, Y.;  Chen, Y. J.;  Cho, J. Y.;  Chung, M. C. M.;  Cordwell, S. J.; et al.
Adobe PDF | Favorite |   IF:6.1/6.0 | Submit date：2022/08/31
Proteomics  Proteome  Human  Aohupo  History  
Asia-Oceania HUPO: Past, Present, and Future Journal article
Ishihama, Yasushi, Chen, Yu-Ju, Cho, Je-Yoel, Chung, Max Ching Ming, Cordwell, Stuart J., Low, Teck Yew, Poon, Terence Chuen Wai, Ho Jeong Kwon. Asia-Oceania HUPO: Past, Present, and Future[J]. MOLECULAR & CELLULAR PROTEOMICS, 2021, 20, 100048.
Authors:  Ishihama, Yasushi;  Chen, Yu-Ju;  Cho, Je-Yoel;  Chung, Max Ching Ming;  Cordwell, Stuart J.; et al.
Adobe PDF | Favorite | TC[WOS]:1 TC[Scopus]:1  IF:6.1/6.0 | Submit date：2023/09/03
Asia Oceania Human Proteome Organization  Aohupo  Proteomics  Human Proteome  Asia Oceania  History  
Triggering of cancer cell cycle arrest by a novel scorpion venom-derived peptide-Gonearrestide Journal article
Li, Bin, Lyu, Peng, Xi, Xinping, Ge, Lilin, Mahadevappa, Ravikiran, Shaw, Chris, Kwok, Hang Fai. Triggering of cancer cell cycle arrest by a novel scorpion venom-derived peptide-Gonearrestide[J]. JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2018, 22(9), 4460-4473.
Authors:  Li, Bin;  Lyu, Peng;  Xi, Xinping;  Ge, Lilin;  Mahadevappa, Ravikiran; et al.
Favorite | TC[WOS]:41 TC[Scopus]:42 | Submit date：2018/10/30
Anticancer Mechanism  Binding Sites  Ms  Ms Proteome  Ngs Transcriptome  Signalling Pathways  Venom Library  
Triggering of cancer cell cycle arrest by a novel scorpion venom-derived peptide -- Gonearrestide Journal article
Li, B., Lyu, P., Xi, X., Mahadevappa, R., Ge, L., Shaw, C., Kwok, H. F.. Triggering of cancer cell cycle arrest by a novel scorpion venom-derived peptide -- Gonearrestide[J]. Journal of Cellular and Molecular Medicine, 2018, DOI:10.1111/jcmm.13745---.
Authors:  Li, B.;  Lyu, P.;  Xi, X.;  Mahadevappa, R.;  Ge, L.; et al.
Favorite |  | Submit date：2022/06/02
Venom library  NGS transcriptome  MS/MS proteome  Anticancer mechanism  Signaling pathways  Binding sites  
Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer Journal article
Hoadley K.A., Yau C., Hinoue T., Wolf D.M., Lazar A.J., Drill E., Shen R., Taylor A.M., Cherniack A.D., Thorsson V., Akbani R., Bowlby R., Wong C.K., Wiznerowicz M., Sanchez-Vega F., Robertson A.G., Schneider B.G., Lawrence M.S., Noushmehr H., Malta T.M., Caesar-Johnson S.J., Demchok J.A., Felau I., Kasapi M., Ferguson M.L., Hutter C.M., Sofia H.J., Tarnuzzer R., Wang Z., Yang L., Zenklusen J.C., Zhang J.J., Chudamani S., Liu J., Lolla L., Naresh R., Pihl T., Sun Q., Wan Y., Wu Y., Cho J., DeFreitas T., Frazer S., Gehlenborg N., Getz G., Heiman D.I., Kim J., Lawrence M.S., Lin P., Meier S., Noble M.S., Saksena G., Voet D., Zhang H., Bernard B., Chambwe N., Dhankani V., Knijnenburg T., Kramer R., Leinonen K., Liu Y., Miller M., Reynolds S., Shmulevich I., Thorsson V., Zhang W., Akbani R., Broom B.M., Hegde A.M., Ju Z., Kanchi R.S., Korkut A., Li J., Liang H., Ling S., Liu W., Lu Y., Mills G.B., Ng K.-S., Rao A., Ryan M., Wang J., Weinstein J.N., Zhang J., Abeshouse A., Armenia J., Chakravarty D., Chatila W.K., de Bruijn I., Gao J., Gross B.E., Heins Z.J., Kundra R., La K., Ladanyi M., Luna A., Nissan M.G., Ochoa A., Phillips S.M., Reznik E., Sanchez-Vega F., Sander C., Schultz N., Sheridan R., Sumer S.O., Sun Y., Taylor B.S., Wang J., Zhang H., Anur P., Peto M., Spellman P., Benz C., Stuart J.M., Wong C.K., Yau C., Hayes D.N., Parker J.S., Wilkerson M.D., Ally A., Balasundaram M., Bowlby R., Brooks D., Carlsen R., Chuah E., Dhalla N., Holt R., Jones S.J.M., Kasaian K., Lee D., Ma Y., Marra M.A., Mayo M., Moore R.A., Mungall A.J., Mungall K., Robertson A.G., Sadeghi S., Schein J.E., Sipahimalani P., Tam A., Thiessen N., Tse K., Wong T., Berger A.C., Beroukhim R., Cherniack A.D., Cibulskis C., Gabriel S.B., Gao G.F., Ha G., Meyerson M., Schumacher S.E., Shih J., Kucherlapati M.H., Kucherlapati R.S., Baylin S., Cope L., Danilova L., Bootwalla M.S., Lai P.H., Maglinte D.T., Van Den Berg D.J., Weisenberger D.J., Auman J.T., Balu S., Bodenheimer T., Fan C., Hoadley K.A., Hoyle A.P., Jefferys S.R., Jones C.D., Meng S., Mieczkowski P.A., Mose L.E., Perou A.H., Perou C.M., Roach J., Shi Y., Simons J.V., Skelly T., Soloway M.G., Tan D., Veluvolu U., Fan H., Hinoue T., Laird P.W., Shen H., Zhou W., Bellair M., Chang K., Covington K., Creighton C.J., Dinh H., Doddapaneni H., Donehower L.A., Drummond J., Gibbs R.A., Glenn R., Hale W., Han Y., Hu J., Korchina V., Lee S., Lewis L., Li W., Liu X., Morgan M., Morton D., Muzny D., Santibanez J., Sheth M., Shinbrot E., Wang L., Wang M., Wheeler D.A., Xi L., Zhao F., Hess J., Appelbaum E.L., Bailey M., Cordes M.G., Ding L., Fronick C.C., Fulton L.A., Fulton R.S., Kandoth C., Mardis E.R., McLellan M.D., Miller C.A., Schmidt H.K., Wilson R.K., Crain D., Curley E., Gardner J., Lau K., Mallery D., Morris S., Paulauskis J., Penny R., Shelton C., Shelton T., Sherman M., Thompson E., Yena P., Bowen J., Gastier-Foster J.M., Gerken M., Leraas K.M., Lichtenberg T.M., Ramirez N.C., Wise L., Zmuda E., Corcoran N., Costello T., Hovens C., Carvalho A.L., de Carvalho A.C., Fregnani J.H., Longatto-Filho A., Reis R.M., Scapulatempo-Neto C., Silveira H.C.S., Vidal D.O., Burnette A., Eschbacher J., Hermes B., Noss A., Singh R., Anderson M.L., Castro P.D., Ittmann M., Huntsman D., Kohl B., Le X., Thorp R., Andry C., Duffy E.R., Lyadov V., Paklina O., Setdikova G., Shabunin A., Tavobilov M., McPherson C., Warnick R., Berkowitz R., Cramer D., Feltmate C., Horowitz N., Kibel A., Muto M., Raut C.P., Malykh A., Barnholtz-Sloan J.S., Barrett W., Devine K., Fulop J., Ostrom Q.T., Shimmel K., Wolinsky Y., Sloan A.E., De Rose A., Giuliante F., Goodman M., Karlan B.Y., Hagedorn C.H., Eckman J., Harr J., Myers J., Tucker K., Zach L.A., Deyarmin B., Hu H., Kvecher L., Larson C., Mural R.J., Somiari S., Vicha A., Zelinka T., Bennett J., Iacocca M., Rabeno B., Swanson P., Latour M., Lacombe L., Tetu B., Bergeron A., McGraw M., Staugaitis S.M., Chabot J., Hibshoosh H., Sepulveda A., Su T., Wang T., Potapova O., Voronina O., Desjardins L., Mariani O., Roman-Roman S., Sastre X., Stern M.-H., Cheng F., Signoretti S., Berchuck A., Bigner D., Lipp E., Marks J., McCall S., McLendon R., Secord A., Sharp A., Behera M., Brat D.J., Chen A., Delman K., Force S., Khuri F., Magliocca K., Maithel S., Olson J.J., Owonikoko T., Pickens A., Ramalingam S., Shin D.M., Sica G., Van Meir E.G., Zhang H., Eijckenboom W., Gillis A., Korpershoek E., Looijenga L., Oosterhuis W., Stoop H., van Kessel K.E., Zwarthoff E.C., Calatozzolo C., Cuppini L., Cuzzubbo S., DiMeco F., Finocchiaro G., Mattei L., Perin A., Pollo B., Chen C., Houck J., Lohavanichbutr P., Hartmann A., Stoehr C., Stoehr R., Taubert H., Wach S., Wullich B., Kycler W., Murawa D., Wiznerowicz M., Chung K., Edenfield W.J., Martin J., Baudin E., Bubley G., Bueno R., De Rienzo A., Richards W.G., Kalkanis S., Mikkelsen T., Noushmehr H., Scarpace L., Girard N., Aymerich M., Campo E., Gine E., Guillermo A.L., Van Bang N., Hanh P.T., Phu B.D., Tang Y., Colman H., Evason K., Dottino P.R., Martignetti J.A., Gabra H., Juhl H., Akeredolu T., Stepa S., Hoon D., Ahn K., Kang K.J., Beuschlein F., Breggia A., Birrer M., Bell D., Borad M., Bryce A.H., Castle E., Chandan V., Cheville J., Copland J.A., Farnell M., Flotte T., Giama N., Ho T., Kendrick M., Kocher J.-P., Kopp K., Moser C., Nagorney D., O'Brien D., O'Neill B.P., Patel T., Petersen G., Que F., Rivera M., Roberts L., Smallridge R., Smyrk T., Stanton M., Thompson R.H., Torbenson M., Yang J.D., Zhang L., Brimo F., Ajani J.A., Gonzalez A.M.A., Behrens C., Bondaruk O., Broaddus R., Czerniak B., Esmaeli B., Fujimoto J., Gershenwald J., Guo C., Lazar A.J., Logothetis C., Meric-Bernstam F., Moran C., Ramondetta L., Rice D., Sood A., Tamboli P., Thompson T., Troncoso P., Tsao A., Wistuba I., Carter C., Haydu L., Hersey P., Jakrot V., Kakavand H., Kefford R., Lee K., Long G., Mann G., Quinn M., Saw R., Scolyer R., Shannon K., Spillane A., Stretch J., Synott M., Thompson J., Wilmott J., Al-Ahmadie H., Chan T.A., Ghossein R., Gopalan A., Levine D.A., Reuter V., Singer S., Singh B., Tien N.V., Broudy T., Mirsaidi C., Nair P., Drwiega P., Miller J., Smith J., Zaren H., Park J.-W., Hung N.P., Kebebew E., Linehan W.M., Metwalli A.R., Pacak K., Pinto P.A., Schiffman M., Schmidt L.S., Vocke C.D., Wentzensen N., Worrell R., Yang H., Moncrieff M., Goparaju C., Melamed J., Pass H., Botnariuc N., Caraman I., Cernat M., Chemencedji I., Clipca A., Doruc S., Gorincioi G., Mura S., Pirtac M., Stancul I., Tcaciuc D., Albert M., Alexopoulou I., Arnaout A., Bartlett J., Engel J., Gilbert S., Parfitt J., Sekhon H., Thomas G., Rassl D.M., Rintoul R.C., Bifulco C., Tamakawa R., Urba W., Hayward N., Timmers H., Antenucci A., Facciolo F., Grazi G., Marino M., Merola R., de Krijger R., Gimenez-Roqueplo A.-P., Piche A., Chevalier S., McKercher G., Birsoy K., Barnett G., Brewer C., Farver C., Naska T., Pennell N.A., Raymond D., Schilero C., Smolenski K., Williams F., Morrison C., Borgia J.A., Liptay M.J., Pool M., Seder C.W., Junker K., Omberg L., Dinkin M., Manikhas G., Alvaro D., Bragazzi M.C., Cardinale V., Carpino G., Gaudio E., Chesla D., Cottingham S., Dubina M., Moiseenko F., Dhanasekaran R., Becker K.-F., Janssen K.-P., Slotta-Huspenina J., Abdel-Rahman M.H., Aziz D., Bell S., Cebulla C.M., Davis A., Duell R., Elder J.B., Hilty J., Kumar B., Lang J., Lehman N.L., Mandt R., Nguyen P., Pilarski R., Rai K., Schoenfield L., Senecal K., Wakely P., Hansen P., Lechan R., Powers J., Tischler A., Grizzle W.E., Sexton K.C., Kastl A., Henderson J., Porten S., Waldmann J., Fassnacht M., Asa S.L., Schadendorf D., Couce M., Graefen M., Huland H., Sauter G., Schlomm T., Simon R., Tennstedt P., Olabode O., Nelson M., Bathe O., Carroll P.R., Chan J.M., Disaia P., Glenn P., Kelley R.K., Landen C.N., Phillips J., Prados M., Simko J., Smith-McCune K., VandenBerg S., Roggin K., Fehrenbach A., Kendler A., Sifri S., Steele R., Jimeno A., Carey F., Forgie I., Mannelli M., Carney M., Hernandez B., Campos B., Herold-Mende C., Jungk C., Unterberg A., von Deimling A., Bossler A., Galbraith J., Jacobus L., Knudson M., Knutson T., Ma D., Milhem M., Sigmund R., Godwin A.K., Madan R., Rosenthal H.G., Adebamowo C., Adebamowo S.N., Boussioutas A., Beer D., Giordano T., Mes-Masson A.-M., Saad F., Bocklage T., Landrum L., Mannel R., Moore K., Moxley K., Postier R., Walker J., Zuna R., Feldman M., Valdivieso F., Dhir R., Luketich J., Pinero E.M.M., Quintero-Aguilo M., Carlotti C.G., Dos Santos J.S., Kemp R., Sankarankuty A., Tirapelli D., Catto J., Agnew K., Swisher E., Creaney J., Robinson B., Shelley C.S., Godwin E.M., Kendall S., Shipman C., Bradford C., Carey T., Haddad A., Moyer J., Peterson L., Prince M., Rozek L., Wolf G., Bowman R., Fong K.M., Yang I., Korst R., Rathmell W.K., Fantacone-Campbell J.L., Hooke J.A., Kovatich A.J., Shriver C.D., DiPersio J., Drake B., Govindan R., Heath S., Ley T., Van Tine B., Westervelt P., Rubin M.A., Lee J.I., Aredes N.D., Mariamidze A., Stuart J.M., Benz C., Laird P.W.. Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer[J]. Cell, 2018, 173(2), 291-304.e6.
Authors:  Hoadley K.A.;  Yau C.;  Hinoue T.;  Wolf D.M.;  Lazar A.J.; et al.
Favorite | TC[WOS]:1439 TC[Scopus]:1506 | Submit date：2019/01/16
Cancer  Cell-of-origin  Genome  Methylome  Organs  Proteome  Subtypes  Tcga  Tissues  Transcriptome  
Characterization of the Molecular Mechanisms Underlying the Chronic Phase of Stroke in a Cynomolgus Monkey Model of Induced Cerebral Ischemia Journal article
Law, Henry C. H., Szeto, Samuel S. W., Quan, Quan, Zhao, Yun, Zhang, Zaijun, Krakovska, Olga, Lui, Leong Ting, Zheng, Chengyou, Lee, Simon M. -Y., Siu, K. W. Michael, Wang, Yuqiang, Chu, Ivan K.. Characterization of the Molecular Mechanisms Underlying the Chronic Phase of Stroke in a Cynomolgus Monkey Model of Induced Cerebral Ischemia[J]. JOURNAL OF PROTEOME RESEARCH, 2017, 16(3), 1150-1166.
Authors:  Law, Henry C. H.;  Szeto, Samuel S. W.;  Quan, Quan;  Zhao, Yun;  Zhang, Zaijun; et al.
Favorite | TC[WOS]:15 TC[Scopus]:17  IF:3.8/4.1 | Submit date：2018/10/30
Stroke Biology  Itraq  Cynomolgus Monkey  Brain Proteome  Ischemia  Chronic Phase  
Proteomic Analysis of HepG2 Hepatocellular Carcinoma cells Treated with Platycodin D Journal article
Lu, J., Lu, DZ, Chen, YF, Dong, YT, Zhang, JR, Li, T, Tang, ZH, Yang, Z. Proteomic Analysis of HepG2 Hepatocellular Carcinoma cells Treated with Platycodin D[J]. Chinese Journal of Natural Medicines, 2015, 673-679.
Authors:  Lu, J.;  Lu, DZ;  Chen, YF;  Dong, YT;  Zhang, JR; et al.
Favorite |   IF:4.0/3.7 | Submit date：2022/03/31
Platycodin d  Hepg2  Proteome  2-d Dige  
Proteomic analysis of hepatocellular carcinoma HepG2 cells treated with platycodin D Journal article
Jin-Jian LU, De-Zhao LU, Yu-Fei CHEN, Ya-Ting DONG, Jun-Ren ZHANG, Ting LI, Zheng-Hai TANG, Zhen YANG. Proteomic analysis of hepatocellular carcinoma HepG2 cells treated with platycodin D[J]. Chinese Journal of Natural Medicines, 2015, 13(9), 673-679.
Authors:  Jin-Jian LU;  De-Zhao LU;  Yu-Fei CHEN;  Ya-Ting DONG;  Jun-Ren ZHANG; et al.
Favorite | TC[Scopus]:23 | Submit date：2018/12/28
2-d Dige  Hepg2  Platycodin d  Proteome