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Chromosome-level genome assembly of the glass catfish ( Kryptopterus vitreolus) reveals molecular clues to its transparent phenotype Journal article
Bian, Chao, Li, Rui Han, Ruan, Zhi Qiang, Chen, Wei Ting, Huang, Yu, Liu, Li Yue, Zhou, Hong Ling, Chong, Cheong Meng, Mu, Xi Dong, Shi, Qiong. Chromosome-level genome assembly of the glass catfish ( Kryptopterus vitreolus) reveals molecular clues to its transparent phenotype[J]. Zoological research, 2024, 45(5), 1027-1036.
Authors:  Bian, Chao;  Li, Rui Han;  Ruan, Zhi Qiang;  Chen, Wei Ting;  Huang, Yu; et al.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:4.0/4.5 | Submit date：2024/09/03
Edn3b−/− Mutant  Glass Catfish  Transparent Phenotype  Whole-genome Sequencing  
Leveraging cfDNA Fragmentomic Features in a Stacked Ensemble Model for Early Detection of Esophageal Squamous Cell Carcinoma Journal article
Zichen Jiao, Xiaoqiang Zhang, Yulong Xuan, Xiaoming Shi, Zirui Zhang, Ao Yu, Ningyou Li, Shanshan Yang, Xiaofeng He, Gefei Zhao, Ruowei Yang, Jianqun Chen, Xuxiaochen Wu, Hua Bao, Fufeng Wang, Wei Ren, Hongwei Liang, Qihan Chen, Tao Wang. Leveraging cfDNA Fragmentomic Features in a Stacked Ensemble Model for Early Detection of Esophageal Squamous Cell Carcinoma[J]. Cell Reports Medicine, 2024, 5(8), 101664.
Authors:  Zichen Jiao;  Xiaoqiang Zhang;  Yulong Xuan;  Xiaoming Shi;  Zirui Zhang; et al.
Favorite | TC[WOS]:0 TC[Scopus]:1  IF:11.7/0 | Submit date：2024/07/30
Esophageal Cancer  Early Detection  Cell-free Dna  Whole-genome Sequencing  Machine Learning  
Exploring the cobia (Rachycentron canadum) genome: Unveiling putative male heterogametic regions and identification of sex-specific markers Journal article
Xueyan Shen, Jie Hu, José M. Yáñez, Giana Bastos Gomes, Zhi Weng Josiah Poon, Derick Foster, Jorge F. Alarcon, Libin Shao, Xinyu Guo, Yunchang Shao, Roger Huerlimann, Chengze Li, Evan Goulden, Kelli Anderson, Guangyi Fan, Jose A. Domingos. Exploring the cobia (Rachycentron canadum) genome: Unveiling putative male heterogametic regions and identification of sex-specific markers[J]. GigaScience, 2024, 13, giae034.
Authors:  Xueyan Shen;  Jie Hu;  José M. Yáñez;  Giana Bastos Gomes;  Zhi Weng Josiah Poon; et al.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:11.8/9.4 | Submit date：2024/10/14
Chromosome-level Genome  Cobia  Molecular Sex Markers  Stlfr  Hi-c  Pacbio Sequencing  
A Food Poisoning Caused by Salmonella Enterica (S. Enteritidis) ST11 Carrying Multi-Antimicrobial Resistance Genes in 2019, China Journal article
Zhang, Zhiyi, Li, Baisheng, Huang, Huitao, Fang, Yanmei, Yang, Wenqiang. A Food Poisoning Caused by Salmonella Enterica (S. Enteritidis) ST11 Carrying Multi-Antimicrobial Resistance Genes in 2019, China[J]. Infection and Drug Resistance, 2024, 17, 1751-1762.
Authors:  Zhang, Zhiyi;  Li, Baisheng;  Huang, Huitao;  Fang, Yanmei;  Yang, Wenqiang
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:2.9/3.6 | Submit date：2024/06/05
Antimicrobial Resistance  Multi-locus Sequence Typing  Salmonella Food Poisoning  Sequence Type 11  Whole-genome Sequencing  
Genome engineering of the human gut microbiome Journal article
Zheng LingGang, Shen JunTao, Chen RuiYue, Hu YucCan, Zhao Wei, Leung Elaine Lai Han, Dai Lei. Genome engineering of the human gut microbiome[J]. Journal of Genetics and Genomics, 2024, 51(5), 479-491.
Authors:  Zheng LingGang;  Shen JunTao;  Chen RuiYue;  Hu YucCan;  Zhao Wei; et al.
Favorite | TC[WOS]:1 TC[Scopus]:1  IF:6.6/5.8 | Submit date：2024/05/16
Cargo Delivery  Genome Editing Reagents  High-throughput Genome Engineering  Non-model Gut Commensals  
The PTM profiling of CTCF reveals the regulation of 3D chromatin structure by O-GlcNAcylation Journal article
Tang, Xiuxiao, Zeng, Pengguihang, Liu, Kezhi, Qing, Li, Sun, Yifei, Liu, Xinyi, Lu, Lizi, Wei, Chao, Wang, Jia, Jiang, Shaoshuai, Sun, Jun, Chang, Wakam, Yu, Haopeng, Chen, Hebing, Zhou, Jiaguo, Xu, Chengfang, Fan, Lili, Miao, Yi Liang, Ding, Junjun. The PTM profiling of CTCF reveals the regulation of 3D chromatin structure by O-GlcNAcylation[J]. Nature Communications, 2024, 15(1), 2813.
Authors:  Tang, Xiuxiao;  Zeng, Pengguihang;  Liu, Kezhi;  Qing, Li;  Sun, Yifei; et al.
Favorite | TC[WOS]:2 TC[Scopus]:2  IF:14.7/16.1 | Submit date：2024/05/16
Ccctc-binding-factor  Differential Expression  Phosphorylation Sites  Nuclear Factor  Genome  Gene  Pluripotency  Domains  Dna  Identification  
Single cell analyses of cancer cells identified two regulatorily and functionally distinct categories in differentially expressed genes among tumor subclones Journal article
Cao, Wei, Wang, Xuefei, Luo, Kaiwen, Li, Yang, Sun, Jiahong, Fu, Ruqing, Zhang, Qi, Hong, Ni, Cheung, Edwin, Jin, Wenfei. Single cell analyses of cancer cells identified two regulatorily and functionally distinct categories in differentially expressed genes among tumor subclones[J]. Heliyon, 2024, 10(6), e28071.
Authors:  Cao, Wei;  Wang, Xuefei;  Luo, Kaiwen;  Li, Yang;  Sun, Jiahong; et al.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:3.4/3.9 | Submit date：2024/04/02
Colorectal Cancer  Single Cell Rna Sequencing  Single Cell Whole Genome Sequencing  Copy Number Variations  Differentially Expressed Gene  Cell-cell Communication  
Evolutionary origin of germline pathogenic variants in human DNA mismatch repair genes Journal article
Lei, Huijun, Li, Jiaheng, Zhao, Bojin, Kou, Si Hoi, Xiao, Fengxia, Chen, Tianhui, Wang, San Ming. Evolutionary origin of germline pathogenic variants in human DNA mismatch repair genes[J]. Human Genomics, 2024, 18(1), 5.
Authors:  Lei, Huijun;  Li, Jiaheng;  Zhao, Bojin;  Kou, Si Hoi;  Xiao, Fengxia; et al.
Favorite | TC[WOS]:0 TC[Scopus]:0  IF:3.8/4.0 | Submit date：2024/05/16
Ancient Genome  Conservation  Dna Mismatch Repair  Evolutionary Origin  Pathogenic Variant  
A Brief Overview of Synthetic Biology Journal article
Li, Yujuan, Fu, Xiongfei, Zhang, Xianen. A Brief Overview of Synthetic Biology[J]. China Biotechnology, 2024, 44(1), 52-60.
Authors:  Li, Yujuan;  Fu, Xiongfei;  Zhang, Xianen
Favorite | TC[Scopus]:1 | Submit date：2024/05/16
Disciplinary Framework  Enabling Technology  Engineering Biology  Genome Editing  Synthetic Biology  
Molecular Modulators and Receptors of Selective Autophagy: Disease Implication and Identification Strategies Review article
2024
Authors:  Wu, Ming Yue;  Li, Zhe Wei;  Lu, Jia Hong
Favorite | TC[WOS]:1 TC[Scopus]:1  IF:8.2/8.3 | Submit date：2024/05/16
Autophagy  Genome-wide Screening  Protein-protein Interaction  Screening Technology  Selective Autophagy