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Comparative genomics provides insights into the aquatic adaptations of mammals Journal article
Yuan, Yuan, Zhang, Yaolei, Zhang, Peijun, Liu, Chang, Wang, Jiahao, Gao, Haiyu, Rus Hoelzel, A., Seim, Inge, Lv, Meiqi, Lin, Mingli, Dong, Lijun, Gao, Haoyang, Yang, Zixin, Caruso, Francesco, Lin, Wenzhi, Da Fonseca, Rute R., Wang, Ding, Wang, Xianyan, Rasmussen, Marianne H., Liu, Mingming, Zheng, Jinsong, Zhao, Liyuan, Campos, Paula F., Kang, Hui, Iversen, Maria, Song, Yue, Guo, Xinyu, Guo, Jiao, Qin, Yating, Pan, Shanshan, Xu, Qiwu, Meng, Lingfeng, Yunga, A., Liu, Shanshan, Ming-Yuen Lee, Simon, Liu, Xin, Xu, Xun, Yang, Huanming, Fan, Guangyi, Wang, Kun, Li, Songhai. Comparative genomics provides insights into the aquatic adaptations of mammals[J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2021, 118(37), e2106080118.
Authors:  Yuan, Yuan;  Zhang, Yaolei;  Zhang, Peijun;  Liu, Chang;  Wang, Jiahao; et al.
Favorite | TC[WOS]:57 TC[Scopus]:57  IF:9.4/10.8 | Submit date:2021/12/08
Aquatic Adaptation  Comparative Genomics  Marine Mammals  
The White-Spotted Bamboo Shark Genome Reveals Chromosome Rearrangements and Fast-Evolving Immune Genes of Cartilaginous Fish Journal article
Zhang, Yaolei, Gao, Haoyang, Li, Hanbo, Guo, Jiao, Ouyang, Bingjie, Wang, Meiniang, Xu, Qiwu, Wang, Jiahao, Lv, Meiqi, Guo, Xinyu, Liu, Qun, Wei, Likun, Ren, Han, Xi, Yang, Guo, Yang, Ren, Bingzhao, Pan, Shanshan, Liu, Chuxin, Ding, Xiaoyan, Xiang, Haitao, Yu, Yingjia, Song, Yue, Meng, Lingfeng, Liu, Shanshan, Wang, Jun, Jiang, Yuan, Shi, Jiahai, Liu, Shiping, Sabir, Jamal S.M., Sabir, Mumdooh J., Khan, Muhummadh, Hajrah, Nahid H., Ming-Yuen Lee, Simon, Xu, Xun, Yang, Huanming, Wang, Jian, Fan, Guangyi, Yang, Naibo, Liu, Xin. The White-Spotted Bamboo Shark Genome Reveals Chromosome Rearrangements and Fast-Evolving Immune Genes of Cartilaginous Fish[J]. iScience, 2020, 23(11).
Authors:  Zhang, Yaolei;  Gao, Haoyang;  Li, Hanbo;  Guo, Jiao;  Ouyang, Bingjie; et al.
Favorite | TC[WOS]:29 TC[Scopus]:32  IF:4.6/5.0 | Submit date:2022/10/07
Biological Sciences  Evolutionary Biology  Genetics  Genomics  Phylogenetics  
The Chromosome Level Genome and Genome-wide Association Study for the Agronomic Traits of Panax Notoginseng Journal article
Fan, Guangyi, Liu, Xiaochuan, Sun, Shuai, Shi, Chengcheng, Du, Xiao, Han, Kai, Yang, Binrui, Fu, Yuanyuan, Liu, Minghua, Seim, Inge, Zhang, He, Xu, Qiwu, Wang, Jiahao, Su, Xiaoshan, Shao, Libin, Zhu, Yuanfang, Shao, Yunchang, Zhao, Yunpeng, Wong, Andrew KC, Zhuang, Dennis, Chen, Wenbin, Zhang, Gengyun, Yang, Huanming, Xu, Xun, Tsui, Stephen Kwok Wing, Liu, Xin, Lee, Simon Ming Yue. The Chromosome Level Genome and Genome-wide Association Study for the Agronomic Traits of Panax Notoginseng[J]. iScience, 2020, 23(9), 101538.
Authors:  Fan, Guangyi;  Liu, Xiaochuan;  Sun, Shuai;  Shi, Chengcheng;  Du, Xiao; et al.
Favorite | TC[WOS]:33 TC[Scopus]:35  IF:4.6/5.0 | Submit date:2021/12/06
Resequencing 545 ginkgo genomes across the world reveals the evolutionary history of the living fossil Journal article
Yun-Peng Zhao, Guangyi Fan, Ping-Ping Yin, Shuai Sun, Ning Li, Xiaoning Hong, Gang Hu, He Zhang, Fu-Min Zhang, Jing-Dan Han, Ya-Jun Hao, Qiwu Xu, Xianwei Yang, Wenjie Xia, Wenbin Chen, Han-Yang Lin, Rui Zhang, Jiang Chen, Xiao-Ming Zheng, Simon Ming-Yuen Lee, Joongku Lee, Koichi Uehara, Jian Wang, Huanming Yang, Cheng-Xin Fu, Xin Liu, Xun Xu, Song Ge. Resequencing 545 ginkgo genomes across the world reveals the evolutionary history of the living fossil[J]. NATURE COMMUNICATIONS, 2019, 10, 4201.
Authors:  Yun-Peng Zhao;  Guangyi Fan;  Ping-Ping Yin;  Shuai Sun;  Ning Li; et al.
Favorite | TC[WOS]:109 TC[Scopus]:123  IF:14.7/16.1 | Submit date:2020/01/16
The first chromosome‐level genome for a marine mammal as a resource to study ecology and evolution Journal article
Guangyi Fan, Yaolei Zhang, Xiaochuan Liu, Jiahao Wang, Zeguo Sun, Shuai Sun, He Zhang, Jianwei Chen, Meiqi Lv, Kai Han, Xiaoxuan Tan, Jie Hu, Rui Guan, Yuanyuan Fu, Shanshan Liu, Xi Chen, Qiwu Xu, Yating Qin, Longqi Liu, Jie Bai, Ou Wang, Jingbo Tang, Haorong Lu, Zhouchun Shang, Bo Wang, Guohai Hu, Xia Zhao, Yan Zou, Ao Chen, Meihua Gong, Wenwei Zhang, Simon M.‐Y. Lee, Songhai Li, Junnian Liu, Zhen Li, Yishan Lu, Jamal S. M. Sabir, Mumdooh J. Sabir, Muhummadh Khan, Nahid H. Hajrah, Ye Yin, Karsten Kristiansen, Huanming Yang, Jian Wang, Xun Xu, Xin Liu. The first chromosome‐level genome for a marine mammal as a resource to study ecology and evolution[J]. MOLECULAR ECOLOGY RESOURCES, 2019, 19(4), 944-956.
Authors:  Guangyi Fan;  Yaolei Zhang;  Xiaochuan Liu;  Jiahao Wang;  Zeguo Sun; et al.
Favorite | TC[WOS]:24 TC[Scopus]:22  IF:5.5/7.8 | Submit date:2020/01/16
Ancestral Chromosomes  Aquatic Adaptations  Genome Assembly  Genomics/proteomics  Major Histocompatibility Complex  Mammals  Molecular Evolution  Sperm Whale  
A survey of the sperm whale (Physeter catodon) commensal microbiome Journal article
Li, Chang, Tan, Xiaoxuan, Bai, Jie, Xu, Qiwu, Liu, Shanshan, Guo, Wenjie, Yu, Cong, Fan, Guangyi, Lu, Yishan, Zhang, He, Yang, Huanming, Chen, Jianwei, Liu, Xin. A survey of the sperm whale (Physeter catodon) commensal microbiome[J]. PeerJ, 2019, 2019(7), e7257.
Authors:  Li, Chang;  Tan, Xiaoxuan;  Bai, Jie;  Xu, Qiwu;  Liu, Shanshan; et al.
Favorite | TC[WOS]:15 TC[Scopus]:17  IF:2.3/2.8 | Submit date:2022/05/23
Commensal Microbiome  Pathogentic Microorganisms  Sperm Whale  
A chromosome-level assembly of the Atlantic herring genome-detection of a supergene and other signals of selection Journal article
Pettersson, Mats E., Rochus, Christina M., Han, Fan, Chen, Junfeng, Hill, Jason, Wallerman, Ola, Fan, Guangyi, Hong, Xiaoning, Xu, Qiwu, Zhang, He, Liu, Shanshan, Liu, Xin, Haggerty, Leanne, Hunt, Toby, Martin, Fergal J., Flicek, Paul, Bunikis, Ignas, Folkvord, Arild, Andersson, Leif. A chromosome-level assembly of the Atlantic herring genome-detection of a supergene and other signals of selection[J]. Genome Research, 2019, 29(11), 1919-1928.
Authors:  Pettersson, Mats E.;  Rochus, Christina M.;  Han, Fan;  Chen, Junfeng;  Hill, Jason; et al.
Favorite | TC[WOS]:70 TC[Scopus]:73  IF:6.2/8.4 | Submit date:2022/05/23
Chromosome-level reference genome of the Siamese fighting fish Betta splendens, a model species for the study of aggression Journal article
Guangyi Fan, Judy Chan, Kailong Ma, Binrui Yang, He Zhang, Xianwei Yang, Chengcheng Shi, Henry Chun-Hin Law, Zhitao Ren, Qiwu Xu, Qun Liu, Jiahao Wang, Wenbin Chen, Libin Shao, David Goncalves, Andreia Ramos, Sara D. Cardoso, Min Guo, Jing Cai, Xun Xu, Jian Wang, Huanming Yang, Xin Liu, Yitao Wang. Chromosome-level reference genome of the Siamese fighting fish Betta splendens, a model species for the study of aggression[J]. GIGASCIENCE, 2018, 7(11).
Authors:  Guangyi Fan;  Judy Chan;  Kailong Ma;  Binrui Yang;  He Zhang; et al.
Favorite | TC[WOS]:25 TC[Scopus]:28  IF:11.8/9.4 | Submit date:2020/07/14
Betta Splendens  Aggression  Hi-c  Chromosomal Genome Assembly  Resequencing  Fish Genome