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An efficient glomerular object locator for renal whole slide images using proposal-free network and dynamic scale evaluation method
Liu, Xueyu1; Li, Ming1; Wu, Yongfei1,2; Chen, Yilin1; Hao, Fang1; Zhou, Daoxiang1; Wang, Chen3; Ma, Chuanfeng1; Shi, Guangze1; Zhou, Xiaoshuang4
2022-03-18
Source PublicationAI Communications
ISSN0921-7126
Volume34Issue:4Pages:245-258
Abstract

In the diagnosis of chronic kidney disease, glomerulus as the blood filter provides important information for an accurate disease diagnosis. Thus automatic localization of the glomeruli is the necessary groundwork for future auxiliary kidney disease diagnosis, such as glomerular classification and area measurement. In this paper, we propose an efficient glomerular object locator in kidney whole slide image(WSI) based on proposal-free network and dynamic scale evaluation method. In the training phase, we construct an intensive proposal-free network which can learn efficiently the fine-grained features of the glomerulus. In the evaluation phase, a dynamic scale evaluation method is utilized to help the well-trained model find the most appropriate evaluation scale for each high-resolution WSI. We collect and digitalize 1204 renal biopsy microscope slides containing more than 41000 annotated glomeruli, which is the largest number of dataset to our best knowledge. We validate the each component of the proposed locator via the ablation study. Experimental results confirm that the proposed locator outperforms recently proposed approaches and pathologists by comparing F 1 and run time in localizing glomeruli from WSIs at a resolution of 0.25 μm/pixel and thus achieves state-of-the-art performance. Particularly, the proposed locator can be embedded into the renal intelligent auxiliary diagnosis system for renal clinical diagnosis by localizing glomeruli in high-resolution WSIs effectively.

KeywordDynamic Scale Evaluation Glomerulus Object Locator Proposal-free Network Whole Slide Image
DOI10.3233/AIC-210073
URLView the original
Indexed BySCIE
Language英語English
WOS Research AreaComputer Science
WOS SubjectComputer Science, Artificial Intelligence
WOS IDWOS:000772207000002
PublisherIOS PRESSNIEUWE HEMWEG 6B, 1013 BG AMSTERDAM, NETHERLANDS
Scopus ID2-s2.0-85127455181
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Citation statistics
Document TypeJournal article
CollectionFaculty of Science and Technology
Corresponding AuthorLi, Ming; Zhou, Xiaoshuang
Affiliation1.College of Data Science, Taiyuan University of Technology, Taiyuan, Shanxi, China
2.Faculty of Science and Technology, University of Macau, Taipa, Macao
3.Department of Pathology, Second Hospital of Shanxi Medical University, Taiyuan, Shanxi, China
4.Department of Nephrology, Shanxi Provincial People's Hospital, Taiyuan, Shanxi, China
Recommended Citation
GB/T 7714
Liu, Xueyu,Li, Ming,Wu, Yongfei,et al. An efficient glomerular object locator for renal whole slide images using proposal-free network and dynamic scale evaluation method[J]. AI Communications, 2022, 34(4), 245-258.
APA Liu, Xueyu., Li, Ming., Wu, Yongfei., Chen, Yilin., Hao, Fang., Zhou, Daoxiang., Wang, Chen., Ma, Chuanfeng., Shi, Guangze., & Zhou, Xiaoshuang (2022). An efficient glomerular object locator for renal whole slide images using proposal-free network and dynamic scale evaluation method. AI Communications, 34(4), 245-258.
MLA Liu, Xueyu,et al."An efficient glomerular object locator for renal whole slide images using proposal-free network and dynamic scale evaluation method".AI Communications 34.4(2022):245-258.
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