Residential College | false |
Status | 已發表Published |
Mechanistic insights into the success of xenobiotic degraders resolved from metagenomes of microbial enrichment cultures | |
Li, Junhui1,2; Jia, Chongjian3; Lu, Qihong4; Hungate, Bruce A.2,5; Dijkstra, Paul2,5; Wang, Shanquan4; Wu, Cuiyu6; Chen, Shaohua7; Li, Deqiang8; Shim, Hojae9 | |
2021-09-15 | |
Source Publication | JOURNAL OF HAZARDOUS MATERIALS |
ISSN | 0304-3894 |
Volume | 418Pages:126384 |
Abstract | Even though microbial communities can be more effective at degrading xenobiotics than cultured micro-organisms, yet little is known about the microbial strategies that underpin xenobiotic biodegradation by microbial communities. Here, we employ metagenomic community sequencing to explore the mechanisms that drive the development of 49 xenobiotic-degrading microbial communities, which were enriched from 7 contaminated soils or sediments with a range of xenobiotic compounds. We show that multiple microbial strategies likely drive the development of xenobiotic degrading communities, notably (i) presence of genes encoding catabolic enzymes to degrade xenobiotics; (ii) presence of genes encoding efflux pumps; (iii) auxiliary catabolic genes on plasmids; and (iv) positive interactions dominate microbial communities with efficient degradation. Overall, the integrated analyses of microbial ecological strategies advance our understanding of microbial processes driving the biodegradation of xenobiotics and promote the design of bioremediation systems. |
Keyword | Efflux Pump Interaction Mechanism Metagenome Plasmid Xenobiotic Catabolism |
DOI | 10.1016/j.jhazmat.2021.126384 |
URL | View the original |
Indexed By | SCIE |
Language | 英語English |
WOS Research Area | Engineering ; Environmental Sciences & Ecology |
WOS Subject | Engineering, Environmental ; Environmental Sciences |
WOS ID | WOS:000689379200004 |
Publisher | ELSEVIERRADARWEG 29, 1043 NX AMSTERDAM, NETHERLANDS |
Scopus ID | 2-s2.0-85107968821 |
Fulltext Access | |
Citation statistics | |
Document Type | Journal article |
Collection | Faculty of Science and Technology DEPARTMENT OF CIVIL AND ENVIRONMENTAL ENGINEERING |
Corresponding Author | Li, Junhui; Shim, Hojae |
Affiliation | 1.Vanderbilt Microbiome Initiative, Department of Biological Sciences, Vanderbilt University, Nashville, 37235, United States 2.Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, 86011, United States 3.Guangdong Eco-Engineering Polytechnic, Guangzhou, 510520, China 4.School of Environmental Science and Engineering, Sun Yat-Sen University, Guangzhou, 510006, China 5.Department of Biological Sciences, Northern Arizona University, Flagstaff, 86011, United States 6.College of Natural Resources and Environmental Science, South China Agricultural University, Guangzhou, 510642, China 7.Guangdong Laboratory for Lingnan Modern Agriculture, Integrative Microbiology Research Centre, South China Agricultural University, Guangzhou, 510642, China 8.Department of Pharmacy, The Second Hospital of Hebei Medical University, Shijiazhuang, 050000, China 9.Department of Civil and Environmental Engineering, Faculty of Science and Technology, University of Macau, Macau SAR, 999078, China |
Corresponding Author Affilication | Faculty of Science and Technology |
Recommended Citation GB/T 7714 | Li, Junhui,Jia, Chongjian,Lu, Qihong,et al. Mechanistic insights into the success of xenobiotic degraders resolved from metagenomes of microbial enrichment cultures[J]. JOURNAL OF HAZARDOUS MATERIALS, 2021, 418, 126384. |
APA | Li, Junhui., Jia, Chongjian., Lu, Qihong., Hungate, Bruce A.., Dijkstra, Paul., Wang, Shanquan., Wu, Cuiyu., Chen, Shaohua., Li, Deqiang., & Shim, Hojae (2021). Mechanistic insights into the success of xenobiotic degraders resolved from metagenomes of microbial enrichment cultures. JOURNAL OF HAZARDOUS MATERIALS, 418, 126384. |
MLA | Li, Junhui,et al."Mechanistic insights into the success of xenobiotic degraders resolved from metagenomes of microbial enrichment cultures".JOURNAL OF HAZARDOUS MATERIALS 418(2021):126384. |
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