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Sustained tnf-α stimulation leads to transcriptional memory that greatly enhances signal sensitivity and robustness
Zhao,Zuodong1; Zhang,Zhuqiang1; Li,Jingjing1,2; Dong,Qiang1; Xiong,Jun1; Li,Yingfeng1; Lan,Mengying1,2; Li,Gang3; Zhu,Bing1,2
2020-11-06
Source PublicationeLife
ISSN2050-084X
Volume9Pages:e61965
Abstract

Transcriptional memory allows certain genes to respond to previously experienced signals more robustly. However, whether and how the key proinflammatory cytokine TNF-α mediates transcriptional memory are poorly understood. Using HEK293F cells as a model system, we report that sustained TNF-α stimulation induces transcriptional memory dependent on TET enzymes. The hypomethylated status of transcriptional regulatory regions can be inherited, facilitating NF-kB binding and more robust subsequent activation. A high initial methylation level and CpG density around kB sites are correlated with the functional potential of transcriptional memory modules. Interestingly, the CALCB gene, encoding the proven migraine therapeutic target CGRP, exhibits the best transcriptional memory. A neighboring primate-specific endogenous retrovirus stimulates more rapid, more strong, and at least 100-fold more sensitive CALCB induction in subsequent TNF-α stimulation. Our study reveals that TNF-α-mediated transcriptional memory is governed by active DNA demethylation and greatly sensitizes memory genes to much lower doses of inflammatory cues.

DOI10.7554/eLife.61965
URLView the original
Indexed BySCIE
Language英語English
WOS Research AreaLife Sciences & Biomedicine - Other Topics
WOS SubjectBiology
WOS IDWOS:000595589800001
PublishereLIFE SCIENCES PUBL LTDSHERATON HOUSE, CASTLE PARK, CAMBRIDGE CB3 0AX, ENGLAND
Scopus ID2-s2.0-85097004330
Fulltext Access
Citation statistics
Document TypeJournal article
CollectionFaculty of Health Sciences
Corresponding AuthorZhu,Bing
Affiliation1.National Laboratory of Biomacromolecules,CAS Center for Excellence in Biomacromolecules,Institute of Biophysics,Chinese Academy of Sciences,Beijing,China
2.College of Life Sciences,University of Chinese Academy of Sciences,Beijing,China
3.Faculty of Health Sciences,University of Macau,Macau,China
Recommended Citation
GB/T 7714
Zhao,Zuodong,Zhang,Zhuqiang,Li,Jingjing,et al. Sustained tnf-α stimulation leads to transcriptional memory that greatly enhances signal sensitivity and robustness[J]. eLife, 2020, 9, e61965.
APA Zhao,Zuodong., Zhang,Zhuqiang., Li,Jingjing., Dong,Qiang., Xiong,Jun., Li,Yingfeng., Lan,Mengying., Li,Gang., & Zhu,Bing (2020). Sustained tnf-α stimulation leads to transcriptional memory that greatly enhances signal sensitivity and robustness. eLife, 9, e61965.
MLA Zhao,Zuodong,et al."Sustained tnf-α stimulation leads to transcriptional memory that greatly enhances signal sensitivity and robustness".eLife 9(2020):e61965.
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