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Cryo-EM structure and functional analysis of the chromatin remodeler RSF
Zhang, Jiale1,2; Zhao, Heyu1,2; Zou, Binqian1; Li, Huadong3; Dong, Shuqi1,2; Guan, Jiali1,2; Wang, Chi4; Li, Weijie5; Liu, Yutong1; Chen, Yingying1; Rasheed, Nadia1; He, Jun1,6,7
2024-06-01
Source PublicationActa Crystallographica Section F: Structural Biology Communications
ISSN2053-230X
Volume80Issue:Pt 6Pages:125-134
Abstract

The RSF complex belongs to the ISWI chromatin-remodeling family and is composed of two subunits: RSF1 (remodeling and spacing factor 1) and SNF2h (sucrose nonfermenting protein 2 homolog). The RSF complex participates in nucleosome spacing and assembly, and subsequently promotes nucleosome maturation. Although SNF2h has been extensively studied in the last few years, the structural and functional properties of the remodeler RSF1 still remain vague. Here, a cryo-EM structure of the RSF–nucleosome complex is reported. The 3D model shows a two-lobe architecture of RSF, and the structure of the RSF–nucleosome (flanked with linker DNA) complex shows that the RSF complex moves the DNA away from the histone octamer surface at the DNA-entry point. Additionally, a nucleosome-sliding assay and a restriction-enzyme accessibility assay show that the RSF1 subunit may cause changes in the chromatin-remodeling properties of SNF2h. As a ‘nucleosome ruler’, the results of an RSF–dinucleosome binding affinity test led to the proposal that the critical distance that RSF ‘measures’ between two nucleosomes is about 24 base pairs.

KeywordChromatin Remodeling Cryo-em Nucleosome Rsf
DOI10.1107/S2053230X24004655
URLView the original
Indexed BySCIE
Language英語English
WOS Research AreaBiochemistry & Molecular Biology ; Biophysics ; Crystallography
WOS SubjectBiochemical Research Methods ; Biochemistry & Molecular Biology ; Biophysics ; Crystallography
WOS IDWOS:001264467200003
PublisherINT UNION CRYSTALLOGRAPHY, 2 ABBEY SQ, CHESTER CH1 2HU, ENGLAND
Scopus ID2-s2.0-85196766928
Fulltext Access
Citation statistics
Document TypeJournal article
CollectionFaculty of Health Sciences
University of Macau
Corresponding AuthorRasheed, Nadia
Affiliation1.GIBH–HKU Guangdong–Hong Kong Stem Cell and Regenerative Medicine Research Centre, GIBH–CUHK Joint Research Laboratory on Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, Guangdong,
2.University of Chinese Academy of Sciences, Beijing, China
3.Faculty of Health Sciences, University of Macau, Macao
4.School of Life Sciences, University of Science and Technology of China, Hefei, Anhui, China
5.Tomas Lindahl Nobel Laureate Laboratory, The Seventh Affiliated Hospital, Sun Yat-Sen University, Shenzhen, Guangdong, China
6.Key Laboratory of Biological Targeting Diagnosis, Therapy and Rehabilitation of Guangdong Higher Education Institutes, The Fifth Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong, China
7.State Key Laboratory of Respiratory Disease, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Science, Guangzhou, Guangdong, China
Recommended Citation
GB/T 7714
Zhang, Jiale,Zhao, Heyu,Zou, Binqian,et al. Cryo-EM structure and functional analysis of the chromatin remodeler RSF[J]. Acta Crystallographica Section F: Structural Biology Communications, 2024, 80(Pt 6), 125-134.
APA Zhang, Jiale., Zhao, Heyu., Zou, Binqian., Li, Huadong., Dong, Shuqi., Guan, Jiali., Wang, Chi., Li, Weijie., Liu, Yutong., Chen, Yingying., Rasheed, Nadia., & He, Jun (2024). Cryo-EM structure and functional analysis of the chromatin remodeler RSF. Acta Crystallographica Section F: Structural Biology Communications, 80(Pt 6), 125-134.
MLA Zhang, Jiale,et al."Cryo-EM structure and functional analysis of the chromatin remodeler RSF".Acta Crystallographica Section F: Structural Biology Communications 80.Pt 6(2024):125-134.
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