Residential Collegefalse
Status已發表Published
An unsupervised real-time spike sorting system based on optimized OSort
Wu, Yingjiang1,2,3; Li, Ben Zheng4,5; Wang, Liyang6,7; Fan, Shaocan8; Chen, Changhao9; Li, Anan10; Lin, Qin1,2,3; Wang, Panke1,2,3
2023-11-23
Source PublicationJournal of Neural Engineering
ISSN1741-2560
Volume20Issue:6Pages:066015
Abstract

Objective. The OSort algorithm, a pivotal unsupervised spike sorting method, has been implemented in dedicated hardware devices for real-time spike sorting. However, due to the inherent complexity of neural recording environments, OSort still grapples with numerous transient cluster occurrences during the practical sorting process. This leads to substantial memory usage, heavy computational load, and complex hardware architectures, especially in noisy recordings and multi-channel systems. Approach. This study introduces an optimized OSort algorithm (opt-OSort) which utilizes correlation coefficient (CC), instead of Euclidean distance as classification criterion. The CC method not only bolsters the robustness of spike classification amidst the diverse and ever-changing conditions of physiological and recording noise environments, but also can finish the entire sorting procedure within a fixed number of cluster slots, thus preventing a large number of transient clusters. Moreover, the opt-OSort incorporates two configurable validation loops to efficiently reject cluster outliers and track recording variations caused by electrode drifting in real-time. Main results. The opt-OSort significantly reduces transient cluster occurrences by two orders of magnitude and decreases memory usage by 2.5-80 times in the number of pre-allocated transient clusters compared with other hardware implementations of OSort. The opt-OSort maintains an accuracy comparable to offline OSort and other commonly-used algorithms, with a sorting time of 0.68 µs as measured by the hardware-implemented system in both simulated datasets and experimental data. The opt-OSort’s ability to handle variations in neural activity caused by electrode drifting is also demonstrated. Significance. These results present a rapid, precise, and robust spike sorting solution suitable for integration into low-power, portable, closed-loop neural control systems and brain-computer interfaces.

KeywordElectrode Drifting Hardware Implementation Low-power Electronics Osort Spike Sorting
DOI10.1088/1741-2552/ad0d15
URLView the original
Indexed BySCIE
Language英語English
WOS Research AreaEngineering ; Neurosciences & Neurology
WOS SubjectEngineering, Biomedical ; Neurosciences
WOS IDWOS:001107199800001
PublisherIOP Publishing Ltd, TEMPLE CIRCUS, TEMPLE WAY, BRISTOL BS1 6BE, ENGLAND
Scopus ID2-s2.0-85177989035
Fulltext Access
Citation statistics
Document TypeJournal article
CollectionDEPARTMENT OF ELECTRICAL AND COMPUTER ENGINEERING
THE STATE KEY LABORATORY OF ANALOG AND MIXED-SIGNAL VLSI (UNIVERSITY OF MACAU)
Co-First AuthorWu, Yingjiang
Corresponding AuthorLin, Qin; Wang, Panke
Affiliation1.School of Biomedical Engineering, Guangdong Medical University, Dongguan, China
2.Songshan Lake Innovation Center of Medicine and Engineering, Guangdong Medical University, Dongguan, China
3.Dongguan Key Laboratory of Medical Electronics and Medical Imaging Equipment, Dongguan, China
4.Department of Physiology and Biophysics, University of Colorado Anschutz Medical Campus, Aurora, United States
5.Department of Electrical Engineering, University of Colorado Denver, Denver, United States
6.State Key Laboratory of Analog and Mixed Signal VLSI, University of Macau, Macao
7.Department of Electrical and Computer Engineering, University of Macau, Macao
8.School of Electronics and Communication Engineering, Sun Yat-sen University, Shenzhen Campus, Shenzhen, China
9.Zhuhai Hokai Medical Instruments Co., Ltd, Zhuhai, China
10.Jiangsu Key Laboratory of Brain Disease and Bioinformation, Research Center for Biochemistry and Molecular Biology, Xuzhou Medical University, Xuzhou, China
Recommended Citation
GB/T 7714
Wu, Yingjiang,Li, Ben Zheng,Wang, Liyang,et al. An unsupervised real-time spike sorting system based on optimized OSort[J]. Journal of Neural Engineering, 2023, 20(6), 066015.
APA Wu, Yingjiang., Li, Ben Zheng., Wang, Liyang., Fan, Shaocan., Chen, Changhao., Li, Anan., Lin, Qin., & Wang, Panke (2023). An unsupervised real-time spike sorting system based on optimized OSort. Journal of Neural Engineering, 20(6), 066015.
MLA Wu, Yingjiang,et al."An unsupervised real-time spike sorting system based on optimized OSort".Journal of Neural Engineering 20.6(2023):066015.
Files in This Item:
There are no files associated with this item.
Related Services
Recommend this item
Bookmark
Usage statistics
Export to Endnote
Google Scholar
Similar articles in Google Scholar
[Wu, Yingjiang]'s Articles
[Li, Ben Zheng]'s Articles
[Wang, Liyang]'s Articles
Baidu academic
Similar articles in Baidu academic
[Wu, Yingjiang]'s Articles
[Li, Ben Zheng]'s Articles
[Wang, Liyang]'s Articles
Bing Scholar
Similar articles in Bing Scholar
[Wu, Yingjiang]'s Articles
[Li, Ben Zheng]'s Articles
[Wang, Liyang]'s Articles
Terms of Use
No data!
Social Bookmark/Share
All comments (0)
No comment.
 

Items in the repository are protected by copyright, with all rights reserved, unless otherwise indicated.