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FDRdb: A manually curated database of fibrotic disease-Associated RNAome and high-Throughput datasets
Wang, Chengyu1,2; Chen, Tingting1; Mu, Yuchen1; Liang, Xuan1; Xiong, Kai1; Ai, Liqiang1; Gu, Yunyan1; Fan, Xingxing3; Liang, Haihai4
2022-11-11
Source PublicationDatabase
ABS Journal Level2
ISSN1758-0463
Volume2022
Abstract

Fibrosis is a common and serious disease that exists as a complicated impairment in many organs and triggers a complex cascade of responses. The deregulation of Ribonucleic Acids (RNAs) plays important roles in a variety of organ fibrosis cases. However, for fibrotic diseases, there is still a lack of an integrated platform with up-To-date information on RNA deregulation and high-Throughput data. The Fibrotic Disease-Associated RNAome database (FDRdb) (http://www.medsysbio.org/FDRdb) is a manually curated database of fibrotic disease-Associated RNAome information and high-Throughput datasets. This initial release (i) contains 1947 associations between 912 RNAs and 92 fibrotic diseases in eight species; (ii) collects information on 764 datasets of fibrotic diseases; (iii) provides a user-friendly web interface that allows users to browse, search and download the RNAome information on fibrotic diseases and high-Throughput datasets and (iv) provides tools to analyze the expression profiles of fibrotic diseases, including differential expression analysis and pathway enrichment. The FDRdb is a valuable resource for researchers to explore the mechanisms of RNA dysregulation in organ fibrosis. Database URL: http://www.medsysbio.org/FDRdb

DOI10.1093/database/baac095
URLView the original
Indexed BySCIE
Language英語English
WOS Research AreaMathematical & Computational Biology
WOS SubjectMathematical & Computational Biology
WOS IDWOS:000881814300001
PublisherOXFORD UNIV PRESS, GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLAND
Scopus ID2-s2.0-85141561655
Fulltext Access
Citation statistics
Document TypeJournal article
CollectionUniversity of Macau
Corresponding AuthorGu, Yunyan; Fan, Xingxing; Liang, Haihai
Affiliation1.Department of Systems Biology, College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, Baojian Road, Nangang District, Heilongjiang, 150086, China
2.Key Laboratory of Combinatorial Biosynthesis and Drug Discovery, Ministry of Education, Wuhan University School of Pharmaceutical Sciences, Wuhan University, Wuhan, Donghu Road, Wuchang District, 430071, China
3.State Key Lab. of Qual. Res. in Chinese Med./Macau Inst. for Applied Research in Medicine and Health, Macau University of Science and Technology, Taipa, Avenida WaiLong, Macau (SAR), 999078, Macao
4.Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education, College of Pharmacy, Harbin Medical University, Heilongjiang, Baojian Road, Nangang District, Harbin, 150086, China
Corresponding Author AffilicationUniversity of Macau
Recommended Citation
GB/T 7714
Wang, Chengyu,Chen, Tingting,Mu, Yuchen,et al. FDRdb: A manually curated database of fibrotic disease-Associated RNAome and high-Throughput datasets[J]. Database, 2022, 2022.
APA Wang, Chengyu., Chen, Tingting., Mu, Yuchen., Liang, Xuan., Xiong, Kai., Ai, Liqiang., Gu, Yunyan., Fan, Xingxing., & Liang, Haihai (2022). FDRdb: A manually curated database of fibrotic disease-Associated RNAome and high-Throughput datasets. Database, 2022.
MLA Wang, Chengyu,et al."FDRdb: A manually curated database of fibrotic disease-Associated RNAome and high-Throughput datasets".Database 2022(2022).
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