Residential College | false |
Status | 已發表Published |
TP53I13 promotes metastasis in glioma via macrophages, neutrophils, and fibroblasts and is a potential prognostic biomarker | |
Ge, Xinqi1,2; Xu, Manyu1,2; Cheng, Tong1,2; Hu, Nan2; Sun, Pingping1; Lu, Bing1; Wang, Ziheng1,3,4; Li, Jian3 | |
2022-10-07 | |
Source Publication | Frontiers in Immunology |
ISSN | 1664-3224 |
Volume | 13Pages:974346 |
Abstract | Background: TP53I13 is a protein coding tumor suppression gene encoded by the tumor protein p53. Overexpression of TP53I13 impedes tumor cell proliferation. Nevertheless, TP53I13 role and expression in the emergence and progression of glioma (low-grade glioma and glioblastoma) are yet to be identified. Thus, we aim to use comprehensive bioinformatics analyses to investigate TP53I13 and its prognostic value in gliomas. Methods: Multiple databases were consulted to evaluate and assess the expression of TP53I13, such as the Cancer Genome Atlas (TCGA), the Chinese Glioma Genome Atlas (CGGA), GeneMANIA, and Gene Expression Profiling Interactive. TP53I13 expression was further explored using immunohistochemistry (IHC) and multiplex immunohistochemistry (mIHC). Through Gene Set Enrichment Analysis (GSEA), the biological functions of TP53I13 and metastatic processes associated with it were studied. Results: The expression of TP53I13 was higher in tumor samples compared to normal samples. In samples retrieved from the TCGA and CGGA databases, high TP53I13 expression was associated with poor survival outcomes. The analysis of multivariate Cox showed that TP53I13 might be an independent prognostic marker of glioma. It was also found that increased expression of TP53I13 was significantly correlated with PRS type, status, 1p/19q codeletion status, IDH mutation status, chemotherapy, age, and tumor grade. According to CIBERSORT (Cell-type Identification by Estimating Relative Subsets of RNA Transcript), the expression of TP53I13 correlates with macrophages, neutrophils, and dendritic cells. GSEA shows a close correlation between TP53I13 and p53 signaling pathways, DNA replication, and the pentose phosphate pathway. Conclusion: Our results reveal a close correlation between TP53I13 and gliomas. Further, TP53I13 expression could affect the survival outcomes in glioma patients. In addition, TP53I13 was an independent marker that was crucial in regulating the infiltration of immune cells into tumors. As a result of these findings, TP53I13 might represent a new biomarker of immune infiltration and prognosis in patients with gliomas. |
Keyword | Cgga Cibersort Ihc Immune Infiltration Tcga Tme Tp53i13 |
DOI | 10.3389/fimmu.2022.974346 |
URL | View the original |
Indexed By | SCIE |
Language | 英語English |
WOS Research Area | Immunology |
WOS Subject | Immunology |
WOS ID | WOS:000874695000001 |
Scopus ID | 2-s2.0-85140346700 |
Fulltext Access | |
Citation statistics | |
Document Type | Journal article |
Collection | Centre for Precision Medicine Research and Training |
Corresponding Author | Wang, Ziheng; Li, Jian |
Affiliation | 1.Department of Clinical Biobank & Institute of Oncology, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China 2.Medical School of Nantong University, Nantong, China 3.Department of Neurosurgery, Affiliated Hospital of Nantong University, Medical School of Nantong University, Nantong, China 4.Centre for Precision Medicine Research and Training, Faculty of Health Sciences, University of Macau, Macau SAR, China |
Corresponding Author Affilication | Faculty of Health Sciences |
Recommended Citation GB/T 7714 | Ge, Xinqi,Xu, Manyu,Cheng, Tong,et al. TP53I13 promotes metastasis in glioma via macrophages, neutrophils, and fibroblasts and is a potential prognostic biomarker[J]. Frontiers in Immunology, 2022, 13, 974346. |
APA | Ge, Xinqi., Xu, Manyu., Cheng, Tong., Hu, Nan., Sun, Pingping., Lu, Bing., Wang, Ziheng., & Li, Jian (2022). TP53I13 promotes metastasis in glioma via macrophages, neutrophils, and fibroblasts and is a potential prognostic biomarker. Frontiers in Immunology, 13, 974346. |
MLA | Ge, Xinqi,et al."TP53I13 promotes metastasis in glioma via macrophages, neutrophils, and fibroblasts and is a potential prognostic biomarker".Frontiers in Immunology 13(2022):974346. |
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